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Universal DNA methylation age across mammalian tissues

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posted on 2023-09-25, 02:43 authored by Ake Lu, Zhe Fei, Alex CaultonAlex Caulton, Shannon ClarkeShannon Clarke, Steve Horvath

This article has 187 Authors.

Aging, often considered a result of random cellular damage, can be accurately estimated using DNA methylation profiles, the foundation of pan-tissue epigenetic clocks. Here, we demonstrate the development of universal pan-mammalian clocks, using 11,754 methylation arrays from our Mammalian Methylation Consortium, which encompass 59 tissue types across 185 mammalian species. These predictive models estimate mammalian tissue age with high accuracy (r > 0.96). Age deviations correlate with human mortality risk, mouse somatotropic axis mutations and caloric restriction. We identified specific cytosines with methylation levels that change with age across numerous species. These sites, highly enriched in polycomb repressive complex 2-binding locations, are near genes implicated in mammalian development, cancer, obesity and longevity. Our findings offer new evidence suggesting that aging is evolutionarily conserved and intertwined with developmental processes across all mammals.

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© The Author(s) 2023, corrected publication 2023. Open Access. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

Publication date

2023-08-10

Project number

  • Non revenue

Language

  • English

Does this contain Māori information or data?

  • No

Publisher

Springer Nature

Journal title

Nature Aging

ISSN

2662-8465

Volume/issue number

3

Page numbers

1144–1166

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