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Genetic connectedness between Norwegian White sheep and New Zealand Composite sheep populations with similar development history

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posted on 2023-05-03, 19:38 authored by Hinayah Rojas Oliveira, John McEwanJohn McEwan, Jette Jakobsen, Thor Blichfeldt, Theodorus Meuwissen, Natalie Pickering, Shannon ClarkeShannon Clarke, Luiz Brito
The Norwegian White sheep (NWS) and New Zealand Terminal Sire Composite (NZC) sheep breeds have been developed based on crossing of multiple breeds, mainly of Northern European origin. A close genetic relationship between these populations could enable across-country genomic evaluations. The main objectives of this study were to assess the genetic connectedness between Norwegian and New Zealand sheep populations and estimate numerous genetic diversity metrics for these two populations. A total of 792 NWS and 16,912 NZC animals were genotyped using a high-density Illumina SNP chip panel (∼606K SNPs). The NZC animals were grouped based on their breed composition as: Finn, Lamb Supreme, Primera, Texel, “Other Dual Purpose”, and “Other Terminal Sire”. The average level of linkage disequilibrium ranged from 0.156 (for Primera) to 0.231 (for Finn). The lowest consistency of gametic phase was estimated between NWS and Finn (0.397), and between NWS and Texel (0.443), respectively. Similar consistency of gametic phase was estimated between NWS and the other NZC populations (∼ 0.52). For all composite sheep populations analyzed in this study, the majority of runs of homozygosity (ROH) segments identified had short length (<2,500 kb), indicating ancient (instead of recent) inbreeding. The variation in the number of ROH segments observed in the NWS was similar to the variation observed in Primera and Lamb Supreme. There was no clear discrimination between NWS and NZC based on the first few principal components. In addition, based on admixture analyses, there seems to be a significant overlap of the ancestral populations that contributed to the development of both NWS and NZC. There were no evident signatures of selection in these populations, which might be due to recent crossbreeding. In conclusion, the NWS composite breed was shown to be moderately related to NZC populations, especially Primera and Lamb Supreme. The findings reported here indicate a promising opportunity for collaborative genomic analyses involving NWS and NZC sheep populations.

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Copyright © 2020 Oliveira, McEwan, Jakobsen, Blichfeldt, Meuwissen, Pickering, Clarke and Brito. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

Language

  • English

Does this contain Māori information or data?

  • No

Publisher

Frontiers Media

Journal title

Frontiers in Genetics

ISSN

1664-8021

Citation

Oliveira, H. R., McEwan, J. C., Jakobsen, J., Blichfeldt, T., Meuwissen, T., Pickering, N., … Brito, L. F. (2020). Genetic connectedness between Norwegian White sheep and New Zealand Composite sheep populations with similar development history. Frontiers in Genetics, 11, 371. doi:10.3389/fgene.2020.00371

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